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  5. Zm00001d022253_T001

Zm00001d022253_T001


Description : BTB-POZ and MATH domain 1


Gene families : OG_01_0000261 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000261_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d022253_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d022253_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_766
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_69


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
BP GO:0016567 protein ubiquitination ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR002083 MATH/TRAF_dom CDD 11 142
IPR008974 TRAF-like Gene3D 9 143
IPR011333 SKP1/BTB/POZ_sf Gene3D 144 299
IPR011333 SKP1/BTB/POZ_sf SUPERFAMILY 154 268
IPR000210 BTB/POZ_dom SMART 171 270
IPR000210 BTB/POZ_dom ProSiteProfiles 171 232
IPR045005 BPM1-6 PANTHER 11 332
IPR000210 BTB/POZ_dom Pfam 169 266
IPR045005 BPM1-6 PANTHER 5 332
IPR011333 SKP1/BTB/POZ_sf Gene3D 144 299
IPR008974 TRAF-like Gene3D 9 143
IPR011333 SKP1/BTB/POZ_sf SUPERFAMILY 154 268
IPR000210 BTB/POZ_dom SMART 171 270
IPR002083 MATH/TRAF_dom CDD 11 142
IPR000210 BTB/POZ_dom ProSiteProfiles 171 232
IPR000210 BTB/POZ_dom Pfam 168 266

No CAZYmes available for this sequence

No external refs found!