- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : Transducin/WD40 repeat-like superfamily protein
Gene families : OG_01_0013044 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0013044_tree
Sequence : cds (download), rna (download), protein (download)
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d022257_T002 | |
| Neighborhood | Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d022257_T002 | No neighbors in network |
| Cluster | Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_57 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | ISM | GOs from InterProScan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Source | Start | Stop |
|---|---|---|---|---|
| IPR015943 | WD40/YVTN_repeat-like_dom_sf | Gene3D | 2 | 220 |
| IPR001680 | WD40_rpt | SMART | 249 | 296 |
| IPR001680 | WD40_rpt | SMART | 35 | 74 |
| IPR001680 | WD40_rpt | SMART | 209 | 246 |
| IPR001680 | WD40_rpt | SMART | 77 | 119 |
| IPR019775 | WD40_repeat_CS | ProSitePatterns | 283 | 297 |
| IPR001680 | WD40_rpt | Pfam | 38 | 74 |
| IPR001680 | WD40_rpt | Pfam | 273 | 296 |
| IPR020472 | G-protein_beta_WD-40_rep | PRINTS | 61 | 75 |
| IPR020472 | G-protein_beta_WD-40_rep | PRINTS | 283 | 297 |
| IPR020472 | G-protein_beta_WD-40_rep | PRINTS | 233 | 247 |
| IPR036322 | WD40_repeat_dom_sf | SUPERFAMILY | 3 | 300 |
| IPR001680 | WD40_rpt | ProSiteProfiles | 280 | 299 |
| IPR015943 | WD40/YVTN_repeat-like_dom_sf | Gene3D | 221 | 337 |
| IPR001680 | WD40_rpt | ProSiteProfiles | 42 | 83 |
| IPR001680 | WD40_rpt | ProSiteProfiles | 280 | 299 |
| IPR015943 | WD40/YVTN_repeat-like_dom_sf | Gene3D | 2 | 220 |
| IPR001680 | WD40_rpt | ProSiteProfiles | 42 | 83 |
| IPR036322 | WD40_repeat_dom_sf | SUPERFAMILY | 3 | 300 |
| IPR001680 | WD40_rpt | SMART | 249 | 296 |
| IPR001680 | WD40_rpt | SMART | 35 | 74 |
| IPR001680 | WD40_rpt | SMART | 209 | 246 |
| IPR001680 | WD40_rpt | SMART | 77 | 119 |
| IPR001680 | WD40_rpt | Pfam | 260 | 296 |
| IPR001680 | WD40_rpt | Pfam | 38 | 74 |
| IPR015943 | WD40/YVTN_repeat-like_dom_sf | Gene3D | 221 | 337 |
| IPR020472 | G-protein_beta_WD-40_rep | PRINTS | 61 | 75 |
| IPR020472 | G-protein_beta_WD-40_rep | PRINTS | 283 | 297 |
| IPR020472 | G-protein_beta_WD-40_rep | PRINTS | 233 | 247 |
| IPR019775 | WD40_repeat_CS | ProSitePatterns | 283 | 297 |
No CAZYmes available for this sequence
| No external refs found! |