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  5. Zm00001d022378_T003

Zm00001d022378_T003


Description : transducin family protein / WD-40 repeat family protein


Gene families : OG_01_0004032 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004032_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d022378_T003
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d022378_T003
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_157
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_58


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001680 WD40_rpt ProSiteProfiles 177 212
IPR001680 WD40_rpt Pfam 165 203
IPR001680 WD40_rpt Pfam 256 294
IPR001680 WD40_rpt SMART 297 337
IPR001680 WD40_rpt SMART 162 203
IPR001680 WD40_rpt SMART 254 294
IPR001680 WD40_rpt SMART 206 250
IPR001680 WD40_rpt SMART 113 153
IPR001680 WD40_rpt SMART 54 101
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 1 339
IPR040251 SEC31-like PANTHER 1 1131
IPR024298 ACE1_Sec16_Sec31 Pfam 557 751
IPR001680 WD40_rpt ProSiteProfiles 261 303
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 16 338
IPR001680 WD40_rpt ProSiteProfiles 120 156
IPR001680 WD40_rpt ProSiteProfiles 261 303
IPR001680 WD40_rpt SMART 297 337
IPR001680 WD40_rpt SMART 254 294
IPR001680 WD40_rpt SMART 162 203
IPR001680 WD40_rpt SMART 206 250
IPR001680 WD40_rpt SMART 113 153
IPR001680 WD40_rpt SMART 54 101
IPR001680 WD40_rpt Pfam 256 294
IPR001680 WD40_rpt ProSiteProfiles 120 156
IPR024298 ACE1_Sec16_Sec31 Pfam 557 679
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 16 338
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 1 339
IPR040251 SEC31-like PANTHER 2 1133
IPR001680 WD40_rpt ProSiteProfiles 177 212

No CAZYmes available for this sequence

No external refs found!