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  5. Zm00001d022387_T010

Zm00001d022387_T010


Description : Rho GTPase activation protein (RhoGAP) with PH domain


Gene families : OG_01_0000437 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000437_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d022387_T010
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d022387_T010
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_96
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_110


Type GO Term Name Evidence Source
BP GO:0007165 signal transduction ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001849 PH_domain ProSiteProfiles 35 141
IPR025757 MIP1_Leuzipper Pfam 610 690
IPR001849 PH_domain Pfam 37 140
IPR000198 RhoGAP_dom SMART 194 385
IPR008936 Rho_GTPase_activation_prot SUPERFAMILY 197 390
IPR001849 PH_domain SMART 36 143
IPR000198 RhoGAP_dom Pfam 197 341
IPR008936 Rho_GTPase_activation_prot Gene3D 169 390
IPR000198 RhoGAP_dom ProSiteProfiles 188 388
IPR011993 PH-like_dom_sf Gene3D 25 142
IPR011993 PH-like_dom_sf Gene3D 25 142
IPR000198 RhoGAP_dom ProSiteProfiles 188 388
IPR001849 PH_domain Pfam 37 140
IPR001849 PH_domain ProSiteProfiles 35 141
IPR008936 Rho_GTPase_activation_prot Gene3D 169 390
IPR001849 PH_domain SMART 36 143
IPR000198 RhoGAP_dom SMART 194 385
IPR000198 RhoGAP_dom Pfam 197 341
IPR008936 Rho_GTPase_activation_prot SUPERFAMILY 197 390
IPR025757 MIP1_Leuzipper Pfam 610 690

No CAZYmes available for this sequence

No external refs found!