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  5. Zm00001d022440_T005

Zm00001d022440_T005


Description : HSI2-like 1


Gene families : OG_01_0002868 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002868_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d022440_T005
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d022440_T005
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_130
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_202


Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISM GOs from InterProScan
MF GO:0008270 zinc ion binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR003340 B3_DNA-bd CDD 368 469
IPR003340 B3_DNA-bd SMART 370 470
IPR015300 DNA-bd_pseudobarrel_sf SUPERFAMILY 367 470
IPR003340 B3_DNA-bd Pfam 370 469
IPR011124 Znf_CW Pfam 636 678
IPR015300 DNA-bd_pseudobarrel_sf Gene3D 348 474
IPR003340 B3_DNA-bd ProSiteProfiles 370 471
IPR011124 Znf_CW ProSiteProfiles 631 681
IPR011124 Znf_CW ProSiteProfiles 631 681
IPR003340 B3_DNA-bd CDD 368 469
IPR015300 DNA-bd_pseudobarrel_sf SUPERFAMILY 367 470
IPR003340 B3_DNA-bd SMART 370 470
IPR003340 B3_DNA-bd Pfam 370 469
IPR011124 Znf_CW Pfam 636 678
IPR015300 DNA-bd_pseudobarrel_sf Gene3D 348 474
IPR003340 B3_DNA-bd ProSiteProfiles 370 471

No CAZYmes available for this sequence

No external refs found!