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Description : copper/zinc superoxide dismutase 1
Gene families : OG_01_0002098 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002098_tree
Sequence : cds (download), rna (download), protein (download)
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d022505_T002 | |
| Neighborhood | Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d022505_T002 | |
| Cluster | Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_290 | |
| Cluster | Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_200 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0006801 | superoxide metabolic process | ISM | GOs from InterProScan |
| MF | GO:0046872 | metal ion binding | ISM | GOs from InterProScan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Source | Start | Stop |
|---|---|---|---|---|
| IPR024134 | SOD_Cu/Zn_/chaperone | PANTHER | 39 | 209 |
| IPR018152 | SOD_Cu/Zn_BS | ProSitePatterns | 106 | 116 |
| IPR001424 | SOD_Cu_Zn_dom | PRINTS | 161 | 183 |
| IPR001424 | SOD_Cu_Zn_dom | PRINTS | 186 | 212 |
| IPR001424 | SOD_Cu_Zn_dom | PRINTS | 106 | 128 |
| IPR001424 | SOD_Cu_Zn_dom | PRINTS | 142 | 151 |
| IPR036423 | SOD-like_Cu/Zn_dom_sf | SUPERFAMILY | 68 | 211 |
| IPR001424 | SOD_Cu_Zn_dom | Pfam | 89 | 209 |
| IPR001424 | SOD_Cu_Zn_dom | CDD | 41 | 208 |
| IPR036423 | SOD-like_Cu/Zn_dom_sf | Gene3D | 40 | 212 |
| IPR001424 | SOD_Cu_Zn_dom | CDD | 41 | 208 |
| IPR036423 | SOD-like_Cu/Zn_dom_sf | Gene3D | 40 | 212 |
| IPR036423 | SOD-like_Cu/Zn_dom_sf | SUPERFAMILY | 68 | 211 |
| IPR024134 | SOD_Cu/Zn_/chaperone | PANTHER | 78 | 210 |
| IPR024134 | SOD_Cu/Zn_/chaperone | PANTHER | 32 | 65 |
| IPR001424 | SOD_Cu_Zn_dom | PRINTS | 161 | 183 |
| IPR001424 | SOD_Cu_Zn_dom | PRINTS | 186 | 212 |
| IPR001424 | SOD_Cu_Zn_dom | PRINTS | 106 | 128 |
| IPR001424 | SOD_Cu_Zn_dom | PRINTS | 142 | 151 |
| IPR001424 | SOD_Cu_Zn_dom | Pfam | 90 | 210 |
| IPR018152 | SOD_Cu/Zn_BS | ProSitePatterns | 106 | 116 |
No CAZYmes available for this sequence
| No external refs found! |