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  5. Zm00001d022536_T008

Zm00001d022536_T008


Description : importin alpha isoform 4


Gene families : OG_01_0009764 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0009764_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d022536_T008
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d022536_T008
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_255
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_93


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
CC GO:0005737 cytoplasm ISM GOs from InterProScan
BP GO:0006606 protein import into nucleus ISM GOs from InterProScan
MF GO:0061608 nuclear import signal receptor activity ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR002652 Importin-a_IBB ProSiteProfiles 1 60
IPR024931 Importin_alpha PIRSF 4 550
IPR011989 ARM-like Gene3D 101 519
IPR032413 Arm_3 Pfam 481 530
IPR000225 Armadillo Pfam 139 174
IPR000225 Armadillo Pfam 176 214
IPR000225 Armadillo Pfam 427 466
IPR000225 Armadillo Pfam 384 420
IPR000225 Armadillo ProSiteProfiles 185 227
IPR016024 ARM-type_fold SUPERFAMILY 15 521
IPR000225 Armadillo SMART 341 382
IPR000225 Armadillo SMART 133 174
IPR000225 Armadillo SMART 384 424
IPR000225 Armadillo SMART 427 467
IPR000225 Armadillo SMART 216 257
IPR000225 Armadillo SMART 175 214
IPR000225 Armadillo SMART 258 297
IPR000225 Armadillo SMART 299 339
IPR002652 Importin-a_IBB Pfam 13 122
IPR016024 ARM-type_fold SUPERFAMILY 15 521
IPR000225 Armadillo SMART 341 382
IPR000225 Armadillo SMART 133 174
IPR000225 Armadillo SMART 384 424
IPR000225 Armadillo SMART 427 467
IPR000225 Armadillo SMART 216 257
IPR000225 Armadillo SMART 175 214
IPR000225 Armadillo SMART 258 297
IPR000225 Armadillo SMART 299 339
IPR024931 Importin_alpha PIRSF 4 550
IPR002652 Importin-a_IBB ProSiteProfiles 1 60
IPR032413 Arm_3 Pfam 481 529
IPR000225 Armadillo Pfam 427 465
IPR000225 Armadillo Pfam 385 420
IPR000225 Armadillo Pfam 139 174
IPR000225 Armadillo Pfam 176 214
IPR002652 Importin-a_IBB Pfam 13 122
IPR011989 ARM-like Gene3D 101 519
IPR000225 Armadillo ProSiteProfiles 185 227

No CAZYmes available for this sequence

No external refs found!