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  5. Zm00001d022546_T001

Zm00001d022546_T001


Description : calmodulin 5


Gene families : OG_01_0004647 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004647_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d022546_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d022546_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_171
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_198


Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR002048 EF_hand_dom ProSiteProfiles 8 43
IPR002048 EF_hand_dom SMART 49 77
IPR002048 EF_hand_dom SMART 12 40
IPR002048 EF_hand_dom SMART 85 113
IPR018247 EF_Hand_1_Ca_BS ProSitePatterns 58 70
IPR029058 AB_hydrolase Gene3D 147 350
IPR002048 EF_hand_dom CDD 12 75
IPR005645 FSH-like_dom Pfam 149 344
IPR002048 EF_hand_dom CDD 49 111
IPR018247 EF_Hand_1_Ca_BS ProSitePatterns 21 33
IPR002048 EF_hand_dom ProSiteProfiles 45 80
IPR002048 EF_hand_dom Pfam 12 39
IPR002048 EF_hand_dom ProSiteProfiles 81 116
IPR029058 AB_hydrolase SUPERFAMILY 145 336
IPR018247 EF_Hand_1_Ca_BS ProSitePatterns 94 106
IPR002048 EF_hand_dom Pfam 47 111
IPR011992 EF-hand-dom_pair SUPERFAMILY 1 111
IPR002048 EF_hand_dom CDD 49 111
IPR029058 AB_hydrolase SUPERFAMILY 145 336
IPR002048 EF_hand_dom SMART 49 77
IPR002048 EF_hand_dom SMART 12 40
IPR002048 EF_hand_dom SMART 85 113
IPR002048 EF_hand_dom Pfam 47 110
IPR029058 AB_hydrolase Gene3D 147 350
IPR002048 EF_hand_dom Pfam 2 39
IPR018247 EF_Hand_1_Ca_BS ProSitePatterns 21 33
IPR002048 EF_hand_dom ProSiteProfiles 81 116
IPR002048 EF_hand_dom CDD 12 75
IPR002048 EF_hand_dom ProSiteProfiles 45 80
IPR018247 EF_Hand_1_Ca_BS ProSitePatterns 58 70
IPR011992 EF-hand-dom_pair SUPERFAMILY 1 111
IPR005645 FSH-like_dom Pfam 149 344
IPR018247 EF_Hand_1_Ca_BS ProSitePatterns 94 106
IPR002048 EF_hand_dom ProSiteProfiles 8 43

No CAZYmes available for this sequence

No external refs found!