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  5. Zm00001d023874_T001

Zm00001d023874_T001


Description : CHY-type/CTCHY-type/RING-type Zinc finger protein


Gene families : OG_01_0006045 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0006045_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d023874_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d023874_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_251
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_230


Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR013083 Znf_RING/FYVE/PHD Gene3D 159 210
IPR001841 Znf_RING ProSiteProfiles 166 209
IPR039512 RCHY1_zinc-ribbon Pfam 214 270
IPR001841 Znf_RING Pfam 165 208
IPR008913 Znf_CHY Pfam 35 104
IPR037275 Znf_CTCHY_sf SUPERFAMILY 102 159
IPR037274 Znf_CHY_sf SUPERFAMILY 31 100
IPR001841 Znf_RING SMART 166 208
IPR008913 Znf_CHY ProSiteProfiles 28 99
IPR017921 Znf_CTCHY ProSiteProfiles 101 165
IPR013083 Znf_RING/FYVE/PHD Gene3D 159 210
IPR008913 Znf_CHY Pfam 35 111
IPR017921 Znf_CTCHY ProSiteProfiles 101 165
IPR037275 Znf_CTCHY_sf SUPERFAMILY 102 159
IPR037274 Znf_CHY_sf SUPERFAMILY 31 100
IPR001841 Znf_RING ProSiteProfiles 166 209
IPR039512 RCHY1_zinc-ribbon Pfam 214 270
IPR001841 Znf_RING Pfam 165 208
IPR008913 Znf_CHY ProSiteProfiles 28 99
IPR001841 Znf_RING SMART 166 208

No CAZYmes available for this sequence

No external refs found!