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  5. Zm00001d023908_T001

Zm00001d023908_T001


Description : endoplasmic reticulum auxin binding protein 1


Gene families : OG_01_0001399 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001399_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d023908_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d023908_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_494
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_172


Type GO Term Name Evidence Source
MF GO:0010011 auxin binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR000526 Auxin-bd PANTHER 93 252
IPR014710 RmlC-like_jellyroll Gene3D 92 252
IPR000526 Auxin-bd PRINTS 182 197
IPR000526 Auxin-bd PRINTS 203 225
IPR000526 Auxin-bd PRINTS 96 115
IPR000526 Auxin-bd PRINTS 116 136
IPR000526 Auxin-bd PRINTS 139 163
IPR000526 Auxin-bd PRINTS 225 244
IPR000526 Auxin-bd PRINTS 169 182
IPR011051 RmlC_Cupin_sf SUPERFAMILY 106 241
IPR000526 Auxin-bd Pfam 94 251
IPR000526 Auxin-bd Pfam 94 251
IPR014710 RmlC-like_jellyroll Gene3D 92 252
IPR011051 RmlC_Cupin_sf SUPERFAMILY 106 241
IPR000526 Auxin-bd PANTHER 87 252
IPR000526 Auxin-bd PRINTS 182 197
IPR000526 Auxin-bd PRINTS 203 225
IPR000526 Auxin-bd PRINTS 96 115
IPR000526 Auxin-bd PRINTS 116 136
IPR000526 Auxin-bd PRINTS 139 163
IPR000526 Auxin-bd PRINTS 225 244
IPR000526 Auxin-bd PRINTS 169 182

No CAZYmes available for this sequence

No external refs found!