1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. Zm00001d024225_T024

Zm00001d024225_T024


Description : SET domain protein 2


Gene families : OG_01_0003291 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003291_tree

Sequence : cds (download), rna (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d024225_T024
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d024225_T024
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_81
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_141


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001214 SET_dom ProSiteProfiles 1699 1834
IPR001214 SET_dom SMART 1700 1840
IPR001214 SET_dom Pfam 1748 1834
IPR035445 GYF-like_dom_sf SUPERFAMILY 487 538
IPR045606 SDG2_C Pfam 1845 2257
IPR046341 SET_dom_sf SUPERFAMILY 1708 1857
IPR035445 GYF-like_dom_sf Gene3D 476 559
IPR035445 GYF-like_dom_sf Gene3D 880 954
IPR032675 LRR_dom_sf Gene3D 1091 1224
IPR046341 SET_dom_sf Gene3D 1680 1863
IPR035445 GYF-like_dom_sf SUPERFAMILY 886 935
IPR035445 GYF-like_dom_sf SUPERFAMILY 886 935
IPR001214 SET_dom Pfam 1770 1834
IPR045606 SDG2_C Pfam 1845 2257
IPR035445 GYF-like_dom_sf SUPERFAMILY 487 538
IPR032675 LRR_dom_sf Gene3D 1091 1224
IPR001214 SET_dom ProSiteProfiles 1699 1834
IPR001214 SET_dom SMART 1700 1840
IPR035445 GYF-like_dom_sf Gene3D 476 559
IPR035445 GYF-like_dom_sf Gene3D 880 954

No CAZYmes available for this sequence

No external refs found!