Zm00001d024384_T001

Description : Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein

Gene families : OG_01_0014029 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0014029_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d024384_T001
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d024384_T001	No neighbors in network
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_38

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	GOs from InterProScan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR036893	SBP_sf	SUPERFAMILY	17	77
IPR004333	SBP_dom	ProSiteProfiles	16	93
IPR004333	SBP_dom	Pfam	19	74
IPR044817	SBP-like	PANTHER	3	64
IPR036893	SBP_sf	Gene3D	9	108
IPR044817	SBP-like	PANTHER	11	91
IPR036893	SBP_sf	Gene3D	9	108
IPR004333	SBP_dom	ProSiteProfiles	16	93
IPR036893	SBP_sf	SUPERFAMILY	17	77
IPR004333	SBP_dom	Pfam	19	74

No CAZYmes available for this sequence

External Links

No external refs found!