1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. Zm00001d024594_T001

Zm00001d024594_T001


Description : Cupredoxin superfamily protein


Gene families : OG_01_0001886 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001886_tree

Sequence : cds (download), rna (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d024594_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d024594_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_513
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_12


Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding ISM GOs from InterProScan
MF GO:0016491 oxidoreductase activity ISM GOs from InterProScan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR011706 Cu-oxidase_C Pfam 391 539
IPR045087 Cu-oxidase_fam PANTHER 24 535
IPR008972 Cupredoxin Gene3D 151 344
IPR008972 Cupredoxin SUPERFAMILY 371 558
IPR008972 Cupredoxin SUPERFAMILY 23 166
IPR001117 Cu-oxidase_2nd Pfam 153 307
IPR011707 Cu-oxidase-like_N Pfam 27 141
IPR008972 Cupredoxin Gene3D 9 139
IPR008972 Cupredoxin Gene3D 355 569
IPR008972 Cupredoxin SUPERFAMILY 148 345
IPR034273 CuRO_1_AAO-like CDD 25 138
IPR008972 Cupredoxin Gene3D 151 344
IPR011706 Cu-oxidase_C Pfam 391 539
IPR011707 Cu-oxidase-like_N Pfam 27 141
IPR008972 Cupredoxin Gene3D 9 139
IPR008972 Cupredoxin Gene3D 355 569
IPR001117 Cu-oxidase_2nd Pfam 154 306
IPR008972 Cupredoxin SUPERFAMILY 148 345
IPR045087 Cu-oxidase_fam PANTHER 6 573
IPR008972 Cupredoxin SUPERFAMILY 23 166
IPR034273 CuRO_1_AAO-like CDD 25 138
IPR008972 Cupredoxin SUPERFAMILY 371 558
HMM Family HMM Length Query Length e-Value Query Start Query End
AA1 358 603 2.8e-72 39 522
No external refs found!