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  5. Zm00001d024644_T001

Zm00001d024644_T001


Description : myb-like transcription factor family protein


Gene families : OG_01_0007550 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0007550_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d024644_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d024644_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_155
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_63


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISM GOs from InterProScan
MF GO:0003677 DNA binding ISM GOs from InterProScan
MF GO:0008270 zinc ion binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR009057 Homeobox-like_sf SUPERFAMILY 87 143
IPR001005 SANT/Myb Pfam 93 138
IPR017930 Myb_dom ProSiteProfiles 85 142
IPR001005 SANT/Myb ProSiteProfiles 86 138
IPR001005 SANT/Myb SMART 90 140
IPR006447 Myb_dom_plants NCBIfam 89 141
IPR001878 Znf_CCHC ProSiteProfiles 23 38
IPR001005 SANT/Myb CDD 93 138
IPR017930 Myb_dom ProSiteProfiles 85 142
IPR017930 Myb_dom Pfam 93 137
IPR001878 Znf_CCHC ProSiteProfiles 23 38
IPR001005 SANT/Myb ProSiteProfiles 86 138
IPR009057 Homeobox-like_sf SUPERFAMILY 87 143
IPR001005 SANT/Myb SMART 90 140
IPR006447 Myb_dom_plants TIGRFAM 89 141
IPR001005 SANT/Myb CDD 93 138

No CAZYmes available for this sequence

No external refs found!