Zm00001d024759_T001

Description : Peptide chain release factor 1

Gene families : OG_01_0004571 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004571_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d024759_T001
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d024759_T001
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_156
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_105

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003747	translation release factor activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
BP	GO:0006415	translational termination	ISM	GOs from InterProScan
MF	GO:0008079	translation termination factor activity	None	Extended
MF	GO:0008135	translation factor activity, RNA binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0016149	translation release factor activity, codon specific	ISM	GOs from InterProScan
BP	GO:0022411	cellular component disassembly	None	Extended
BP	GO:0032984	protein-containing complex disassembly	None	Extended
BP	GO:0043933	protein-containing complex organization	None	Extended
MF	GO:0045182	translation regulator activity	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
MF	GO:0090079	translation regulator activity, nucleic acid binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR004373	RF-1	Hamap	61	415
IPR045853	Pep_chain_release_fac_I_sf	SUPERFAMILY	70	406
IPR005139	PCRF	Pfam	69	261
IPR000352	Pep_chain_release_fac_I	Pfam	268	378
IPR005139	PCRF	SMART	121	236
IPR004373	RF-1	NCBIfam	62	412
IPR000352	Pep_chain_release_fac_I	ProSitePatterns	285	301
IPR000352	Pep_chain_release_fac_I	ProSitePatterns	285	301
IPR000352	Pep_chain_release_fac_I	Pfam	268	378
IPR004373	RF-1	TIGRFAM	62	412
IPR005139	PCRF	Pfam	69	261
IPR004373	RF-1	Hamap	61	415
IPR005139	PCRF	SMART	121	236
IPR045853	Pep_chain_release_fac_I_sf	SUPERFAMILY	70	406

No CAZYmes available for this sequence

External Links

No external refs found!