Zm00001d024777_T001

Description : MADS-box transcription factor family protein

Gene families : OG_01_0028388 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0028388_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d024777_T001	No neighbors in network
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d024777_T001
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_79

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
MF	GO:0046983	protein dimerization activity	ISM	GOs from InterProScan
MF	GO:0097159	organic cyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR002100	TF_MADSbox	Pfam	13	55
IPR002100	TF_MADSbox	ProSiteProfiles	3	63
IPR002100	TF_MADSbox	SMART	3	62
IPR036879	TF_MADSbox_sf	Gene3D	15	95
IPR002100	TF_MADSbox	PRINTS	40	61
IPR002100	TF_MADSbox	PRINTS	25	40
IPR002100	TF_MADSbox	PRINTS	5	25
IPR036879	TF_MADSbox_sf	SUPERFAMILY	5	98
IPR002100	TF_MADSbox	ProSiteProfiles	3	63
IPR002100	TF_MADSbox	Pfam	15	55
IPR002100	TF_MADSbox	PRINTS	40	61
IPR002100	TF_MADSbox	PRINTS	25	40
IPR002100	TF_MADSbox	PRINTS	5	25
IPR036879	TF_MADSbox_sf	SUPERFAMILY	5	98
IPR002100	TF_MADSbox	SMART	3	62
IPR036879	TF_MADSbox_sf	Gene3D	15	95

No CAZYmes available for this sequence

External Links

No external refs found!