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Description : tetratricopeptide repeat (TPR)-containing protein
Gene families : OG_01_0002893 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002893_tree
Sequence : cds (download), rna (download), protein (download)
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d024858_T004 | |
| Neighborhood | Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d024858_T004 | |
| Cluster | Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_250 | |
| Cluster | Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_133 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | ISM | GOs from InterProScan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Source | Start | Stop |
|---|---|---|---|---|
| IPR011990 | TPR-like_helical_dom_sf | SUPERFAMILY | 222 | 523 |
| IPR019734 | TPR_repeat | Pfam | 353 | 382 |
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 4 | 147 |
| IPR019734 | TPR_repeat | ProSiteProfiles | 485 | 518 |
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 432 | 556 |
| IPR019734 | TPR_repeat | SMART | 215 | 248 |
| IPR019734 | TPR_repeat | SMART | 141 | 174 |
| IPR019734 | TPR_repeat | SMART | 350 | 383 |
| IPR019734 | TPR_repeat | SMART | 417 | 451 |
| IPR019734 | TPR_repeat | SMART | 317 | 349 |
| IPR019734 | TPR_repeat | SMART | 249 | 282 |
| IPR019734 | TPR_repeat | SMART | 43 | 76 |
| IPR019734 | TPR_repeat | SMART | 485 | 518 |
| IPR011990 | TPR-like_helical_dom_sf | SUPERFAMILY | 44 | 184 |
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 148 | 308 |
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 309 | 431 |
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 309 | 431 |
| IPR019734 | TPR_repeat | ProSiteProfiles | 485 | 518 |
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 432 | 556 |
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 4 | 147 |
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 148 | 308 |
| IPR019734 | TPR_repeat | SMART | 215 | 248 |
| IPR019734 | TPR_repeat | SMART | 141 | 174 |
| IPR019734 | TPR_repeat | SMART | 350 | 383 |
| IPR019734 | TPR_repeat | SMART | 417 | 451 |
| IPR019734 | TPR_repeat | SMART | 249 | 282 |
| IPR019734 | TPR_repeat | SMART | 317 | 349 |
| IPR019734 | TPR_repeat | SMART | 43 | 76 |
| IPR019734 | TPR_repeat | SMART | 485 | 518 |
| IPR019734 | TPR_repeat | Pfam | 352 | 381 |
| IPR011990 | TPR-like_helical_dom_sf | SUPERFAMILY | 222 | 523 |
| IPR011990 | TPR-like_helical_dom_sf | SUPERFAMILY | 44 | 184 |
No CAZYmes available for this sequence
| No external refs found! |