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  5. Zm00001d025050_T001

Zm00001d025050_T001


Description : Signal transduction histidine kinase, hybrid-type, ethylene sensor


Gene families : OG_01_0009449 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0009449_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d025050_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d025050_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_278
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_142


Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity ISM GOs from InterProScan
BP GO:0000160 phosphorelay signal transduction system ISM GOs from InterProScan
MF GO:0004672 protein kinase activity ISM GOs from InterProScan
MF GO:0005515 protein binding ISM GOs from InterProScan
CC GO:0005789 endoplasmic reticulum membrane ISM GOs from InterProScan
BP GO:0007165 signal transduction ISM GOs from InterProScan
BP GO:0009723 response to ethylene ISM GOs from InterProScan
MF GO:0038199 ethylene receptor activity ISM GOs from InterProScan
MF GO:0051740 ethylene binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR036890 HATPase_C_sf Gene3D 483 658
IPR001789 Sig_transdc_resp-reg_receiver Pfam 684 794
IPR003018 GAF SMART 232 391
IPR014525 ETR PIRSF 48 804
IPR029016 GAF-like_dom_sf Gene3D 210 382
IPR005467 His_kinase_dom ProSiteProfiles 424 657
IPR001789 Sig_transdc_resp-reg_receiver SMART 682 797
IPR003018 GAF Pfam 232 381
IPR036097 HisK_dim/P_sf SUPERFAMILY 403 480
IPR001789 Sig_transdc_resp-reg_receiver ProSiteProfiles 683 801
IPR011006 CheY-like_superfamily SUPERFAMILY 678 802
IPR036890 HATPase_C_sf SUPERFAMILY 471 653
IPR001789 Sig_transdc_resp-reg_receiver Pfam 684 793
IPR003018 GAF SMART 232 391
IPR036890 HATPase_C_sf Gene3D 483 658
IPR036097 HisK_dim/P_sf SUPERFAMILY 403 480
IPR001789 Sig_transdc_resp-reg_receiver SMART 682 797
IPR011006 CheY-like_superfamily SUPERFAMILY 678 802
IPR014525 ETR PIRSF 48 804
IPR001789 Sig_transdc_resp-reg_receiver ProSiteProfiles 683 801
IPR029016 GAF-like_dom_sf Gene3D 210 382
IPR003018 GAF Pfam 232 381
IPR036890 HATPase_C_sf SUPERFAMILY 471 653
IPR005467 His_kinase_dom ProSiteProfiles 424 657

No CAZYmes available for this sequence

No external refs found!