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  5. Zm00001d025082_T002

Zm00001d025082_T002


Description : Glycosyl hydrolase family 10 protein


Gene families : OG_01_0008610 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0008610_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d025082_T002 No neighbors in network
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d025082_T002
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_92


Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds ISM GOs from InterProScan
BP GO:0005975 carbohydrate metabolic process ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001000 GH10_dom SMART 259 512
IPR001000 GH10_dom PRINTS 372 383
IPR001000 GH10_dom PRINTS 406 418
IPR001000 GH10_dom PRINTS 334 345
IPR001000 GH10_dom PRINTS 290 302
IPR001000 GH10_dom ProSiteProfiles 213 511
IPR017853 Glycoside_hydrolase_SF SUPERFAMILY 211 519
IPR008979 Galactose-bd-like_sf SUPERFAMILY 86 166
IPR001000 GH10_dom Pfam 223 486
IPR044846 GH10 PANTHER 85 563
IPR001000 GH10_dom ProSiteProfiles 213 511
IPR001000 GH10_dom Pfam 222 484
IPR017853 Glycoside_hydrolase_SF SUPERFAMILY 211 519
IPR001000 GH10_dom SMART 259 512
IPR001000 GH10_dom PRINTS 372 383
IPR001000 GH10_dom PRINTS 406 418
IPR001000 GH10_dom PRINTS 334 345
IPR001000 GH10_dom PRINTS 290 302
IPR044846 GH10 PANTHER 20 568
IPR008979 Galactose-bd-like_sf SUPERFAMILY 86 166
HMM Family HMM Length Query Length e-Value Query Start Query End
CBM22 131 576 2.4e-09 90 161
GH10 303 576 1.5e-63 222 487
No external refs found!