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  5. Zm00001d025111_T007

Zm00001d025111_T007


Description : Transducin family protein / WD-40 repeat family protein


Gene families : OG_01_0005168 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0005168_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d025111_T007
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d025111_T007
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_210
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_58


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR019775 WD40_repeat_CS ProSitePatterns 454 468
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 338 612
IPR000477 RT_dom Pfam 239 333
IPR043502 DNA/RNA_pol_sf SUPERFAMILY 171 335
IPR001680 WD40_rpt Pfam 473 507
IPR001680 WD40_rpt Pfam 428 467
IPR001680 WD40_rpt Pfam 401 424
IPR011047 Quinoprotein_ADH-like_supfam SUPERFAMILY 392 1082
IPR001680 WD40_rpt SMART 1041 1081
IPR001680 WD40_rpt SMART 427 467
IPR001680 WD40_rpt SMART 470 507
IPR001680 WD40_rpt SMART 386 424
IPR001680 WD40_rpt ProSiteProfiles 434 476
IPR011047 Quinoprotein_ADH-like_supfam SUPERFAMILY 392 1082
IPR019775 WD40_repeat_CS ProSitePatterns 454 468
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 338 612
IPR001680 WD40_rpt ProSiteProfiles 434 476
IPR001680 WD40_rpt Pfam 401 424
IPR001680 WD40_rpt Pfam 428 467
IPR000477 RT_dom Pfam 238 333
IPR043502 DNA/RNA_pol_sf SUPERFAMILY 171 335
IPR001680 WD40_rpt SMART 1041 1081
IPR001680 WD40_rpt SMART 427 467
IPR001680 WD40_rpt SMART 470 507
IPR001680 WD40_rpt SMART 386 424

No CAZYmes available for this sequence

No external refs found!