1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. Zm00001d025199_T001

Zm00001d025199_T001


Description : Glycosyl hydrolase family protein with chitinase insertion domain


Gene families : OG_01_0010748 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0010748_tree

Sequence : cds (download), rna (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d025199_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d025199_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_202
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_237


Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process ISM GOs from InterProScan
MF GO:0008061 chitin binding ISM GOs from InterProScan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR029070 Chitinase_insertion_sf SUPERFAMILY 284 359
IPR017853 Glycoside_hydrolase_SF SUPERFAMILY 47 392
IPR001223 Glyco_hydro18_cat Pfam 62 388
IPR011583 Chitinase_II SMART 44 388
IPR001223 Glyco_hydro18_cat ProSiteProfiles 43 405
IPR029070 Chitinase_insertion_sf Gene3D 283 359
IPR001223 Glyco_hydro18_cat Pfam 62 388
IPR017853 Glycoside_hydrolase_SF SUPERFAMILY 47 392
IPR011583 Chitinase_II SMART 44 388
IPR001223 Glyco_hydro18_cat ProSiteProfiles 43 405
IPR029070 Chitinase_insertion_sf SUPERFAMILY 284 359
IPR029070 Chitinase_insertion_sf Gene3D 283 359
HMM Family HMM Length Query Length e-Value Query Start Query End
GH18 296 485 3.4e-47 63 392
No external refs found!