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  5. Zm00001d025278_T025

Zm00001d025278_T025


Description : MEI2-like protein 1


Gene families : OG_01_0002469 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002469_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d025278_T025
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d025278_T025
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_167


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISM GOs from InterProScan
MF GO:0003723 RNA binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR035979 RBD_domain_sf SUPERFAMILY 257 412
IPR000504 RRM_dom ProSiteProfiles 260 333
IPR000504 RRM_dom ProSiteProfiles 344 417
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 251 342
IPR007201 Mei2-like_Rrm_C Pfam 812 908
IPR000504 RRM_dom SMART 345 415
IPR000504 RRM_dom SMART 261 329
IPR000504 RRM_dom SMART 814 890
IPR034454 MEI2-like_RRM3 CDD 815 900
IPR000504 RRM_dom Pfam 262 325
IPR000504 RRM_dom Pfam 348 409
IPR034453 MEI2-like_RRM1 CDD 259 335
IPR035979 RBD_domain_sf SUPERFAMILY 814 898
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 343 429
IPR034453 MEI2-like_RRM1 CDD 259 335
IPR007201 Mei2-like_Rrm_C Pfam 812 908
IPR035979 RBD_domain_sf SUPERFAMILY 814 898
IPR000504 RRM_dom Pfam 348 409
IPR000504 RRM_dom Pfam 262 325
IPR000504 RRM_dom SMART 345 415
IPR000504 RRM_dom SMART 261 329
IPR000504 RRM_dom SMART 814 890
IPR035979 RBD_domain_sf SUPERFAMILY 257 412
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 343 429
IPR000504 RRM_dom ProSiteProfiles 344 417
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 251 342
IPR000504 RRM_dom ProSiteProfiles 260 333
IPR034454 MEI2-like_RRM3 CDD 815 900

No CAZYmes available for this sequence

No external refs found!