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  5. Zm00001d025300_T007

Zm00001d025300_T007


Description : homolog of yeast sucrose nonfermenting 4


Gene families : OG_01_0008832 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0008832_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d025300_T007
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d025300_T007
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_64
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_259


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR000644 CBS_dom Pfam 339 379
IPR032640 AMPK1_CBM Pfam 5 82
IPR014756 Ig_E-set SUPERFAMILY 4 81
IPR013783 Ig-like_fold Gene3D 4 89
IPR046342 CBS_dom_sf Gene3D 119 309
IPR046342 CBS_dom_sf Gene3D 310 382
IPR046342 CBS_dom_sf SUPERFAMILY 125 311
IPR046342 CBS_dom_sf SUPERFAMILY 309 452
IPR032640 AMPK1_CBM Pfam 5 82
IPR000644 CBS_dom Pfam 422 452
IPR013783 Ig-like_fold Gene3D 4 89
IPR014756 Ig_E-set SUPERFAMILY 4 81
HMM Family HMM Length Query Length e-Value Query Start Query End
CBM48 76 454 0.00052 13 70
No external refs found!