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Description : Stabilizer of iron transporter SufD / Polynucleotidyl transferase
Gene families : OG_01_0000015 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000015_tree
Sequence : cds (download), rna (download), protein (download)
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d025331_T002 | |
| Neighborhood | Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d025331_T002 | |
| Cluster | Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_197 | |
| Cluster | Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_22 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | ISM | GOs from InterProScan |
| MF | GO:0005515 | protein binding | ISM | GOs from InterProScan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Source | Start | Stop |
|---|---|---|---|---|
| IPR036397 | RNaseH_sf | Gene3D | 262 | 552 |
| IPR003165 | Piwi | ProSiteProfiles | 192 | 495 |
| IPR002885 | Pentatricopeptide_rpt | Pfam | 28 | 75 |
| IPR002885 | Pentatricopeptide_rpt | NCBIfam | 65 | 94 |
| IPR002885 | Pentatricopeptide_rpt | NCBIfam | 30 | 64 |
| IPR045246 | Piwi_ago-like | CDD | 122 | 503 |
| IPR012337 | RNaseH-like_sf | SUPERFAMILY | 187 | 496 |
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 1 | 111 |
| IPR003165 | Piwi | Pfam | 193 | 495 |
| IPR002885 | Pentatricopeptide_rpt | ProSiteProfiles | 28 | 62 |
| IPR003165 | Piwi | SMART | 192 | 504 |
| IPR002885 | Pentatricopeptide_rpt | ProSiteProfiles | 63 | 97 |
| IPR003165 | Piwi | SMART | 192 | 504 |
| IPR002885 | Pentatricopeptide_rpt | ProSiteProfiles | 28 | 62 |
| IPR002885 | Pentatricopeptide_rpt | Pfam | 28 | 75 |
| IPR002885 | Pentatricopeptide_rpt | ProSiteProfiles | 63 | 97 |
| IPR012337 | RNaseH-like_sf | SUPERFAMILY | 187 | 496 |
| IPR002885 | Pentatricopeptide_rpt | TIGRFAM | 65 | 94 |
| IPR002885 | Pentatricopeptide_rpt | TIGRFAM | 30 | 64 |
| IPR036397 | RNaseH_sf | Gene3D | 262 | 552 |
| IPR003165 | Piwi | ProSiteProfiles | 192 | 495 |
| IPR045246 | Piwi_ago-like | CDD | 122 | 503 |
| IPR003165 | Piwi | Pfam | 193 | 495 |
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 1 | 111 |
No CAZYmes available for this sequence
| No external refs found! |