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  5. Zm00001d025352_T001

Zm00001d025352_T001


Description : ferredoxin 3


Gene families : OG_01_0017589 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0017589_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d025352_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d025352_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_235
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_169


Type GO Term Name Evidence Source
MF GO:0009055 electron transfer activity ISM GOs from InterProScan
BP GO:0022900 electron transport chain ISM GOs from InterProScan
MF GO:0051536 iron-sulfur cluster binding ISM GOs from InterProScan
MF GO:0051537 2 iron, 2 sulfur cluster binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR010241 Fd_pln NCBIfam 58 154
IPR036010 2Fe-2S_ferredoxin-like_sf SUPERFAMILY 59 151
IPR001041 2Fe-2S_ferredoxin-type Pfam 68 140
IPR012675 Beta-grasp_dom_sf Gene3D 57 154
IPR001041 2Fe-2S_ferredoxin-type CDD 67 146
IPR001041 2Fe-2S_ferredoxin-type ProSiteProfiles 60 151
IPR006058 2Fe2S_fd_BS ProSitePatterns 97 105
IPR006058 2Fe2S_fd_BS ProSitePatterns 97 105
IPR001041 2Fe-2S_ferredoxin-type ProSiteProfiles 60 151
IPR001041 2Fe-2S_ferredoxin-type Pfam 68 140
IPR012675 Beta-grasp_dom_sf Gene3D 57 154
IPR010241 Fd_pln TIGRFAM 58 154
IPR001041 2Fe-2S_ferredoxin-type CDD 67 146
IPR036010 2Fe-2S_ferredoxin-like_sf SUPERFAMILY 59 151

No CAZYmes available for this sequence

No external refs found!