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  5. Zm00001d025396_T001

Zm00001d025396_T001


Description : S-locus lectin protein kinase family protein


Gene families : OG_01_0000036 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000036_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d025396_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d025396_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_29
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_293


Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity ISM GOs from InterProScan
MF GO:0004674 protein serine/threonine kinase activity ISM GOs from InterProScan
MF GO:0005524 ATP binding ISM GOs from InterProScan
BP GO:0006468 protein phosphorylation ISM GOs from InterProScan
BP GO:0048544 recognition of pollen ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR003609 Pan_app ProSiteProfiles 344 431
IPR008271 Ser/Thr_kinase_AS ProSitePatterns 627 639
IPR003609 Pan_app SMART 354 430
IPR017441 Protein_kinase_ATP_BS ProSitePatterns 506 529
IPR001480 Bulb-type_lectin_dom ProSiteProfiles 26 152
IPR001480 Bulb-type_lectin_dom Pfam 74 182
IPR036426 Bulb-type_lectin_dom_sf Gene3D 22 153
IPR003609 Pan_app Pfam 356 416
IPR001480 Bulb-type_lectin_dom CDD 41 156
IPR001480 Bulb-type_lectin_dom SMART 32 156
IPR024171 SRK-like_kinase PIRSF 1 810
IPR000719 Prot_kinase_dom SMART 500 780
IPR036426 Bulb-type_lectin_dom_sf SUPERFAMILY 75 185
IPR000719 Prot_kinase_dom Pfam 503 778
IPR000858 S_locus_glycoprot_dom Pfam 213 321
IPR011009 Kinase-like_dom_sf SUPERFAMILY 486 795
IPR000719 Prot_kinase_dom ProSiteProfiles 500 794
IPR000719 Prot_kinase_dom Pfam 503 778
IPR000858 S_locus_glycoprot_dom Pfam 213 321
IPR036426 Bulb-type_lectin_dom_sf Gene3D 22 153
IPR001480 Bulb-type_lectin_dom ProSiteProfiles 26 152
IPR003609 Pan_app Pfam 356 416
IPR017441 Protein_kinase_ATP_BS ProSitePatterns 506 529
IPR003609 Pan_app SMART 354 430
IPR001480 Bulb-type_lectin_dom Pfam 74 182
IPR008271 Ser/Thr_kinase_AS ProSitePatterns 627 639
IPR000719 Prot_kinase_dom ProSiteProfiles 500 794
IPR003609 Pan_app ProSiteProfiles 344 431
IPR001480 Bulb-type_lectin_dom CDD 41 156
IPR011009 Kinase-like_dom_sf SUPERFAMILY 486 795
IPR036426 Bulb-type_lectin_dom_sf SUPERFAMILY 75 185
IPR000719 Prot_kinase_dom SMART 500 780
IPR024171 SRK-like_kinase PIRSF 1 810
IPR001480 Bulb-type_lectin_dom SMART 32 156

No CAZYmes available for this sequence

No external refs found!