Zm00001d025397_T002

Description : ubiquitin interaction motif-containing protein

Gene families : OG_01_0006111 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0006111_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d025397_T002
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d025397_T002
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_170
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_125

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004843	cysteine-type deubiquitinase activity	ISM	GOs from InterProScan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0008234	cysteine-type peptidase activity	None	Extended
BP	GO:0016579	protein deubiquitination	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019783	ubiquitin-like protein peptidase activity	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043687	post-translational protein modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0070646	protein modification by small protein removal	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071108	protein K48-linked deubiquitination	ISM	GOs from InterProScan
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0101005	deubiquitinase activity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
MF	GO:1990380	K48-linked deubiquitinase activity	ISM	GOs from InterProScan

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR003903	UIM_dom	SMART	5	24
IPR025257	MINDY-3/4_CD	SMART	132	492
IPR011992	EF-hand-dom_pair	SUPERFAMILY	437	499
IPR003903	UIM_dom	ProSiteProfiles	5	24
IPR039785	MINY3/4	PANTHER	37	619
IPR025257	MINDY-3/4_CD	Pfam	134	437
IPR025257	MINDY-3/4_CD	Pfam	134	437
IPR025257	MINDY-3/4_CD	SMART	132	492
IPR011992	EF-hand-dom_pair	SUPERFAMILY	437	499
IPR003903	UIM_dom	SMART	5	24
IPR039785	MINY3/4	PANTHER	3	619
IPR003903	UIM_dom	ProSiteProfiles	5	24

No CAZYmes available for this sequence

External Links

No external refs found!