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  5. Zm00001d025699_T001

Zm00001d025699_T001


Description : Transducin/WD40 repeat-like superfamily protein


Gene families : OG_01_0005766 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0005766_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d025699_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d025699_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_169
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_253


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001680 WD40_rpt ProSiteProfiles 304 345
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 288 451
IPR001680 WD40_rpt SMART 124 166
IPR001680 WD40_rpt SMART 297 336
IPR001680 WD40_rpt SMART 201 240
IPR001680 WD40_rpt SMART 243 281
IPR001680 WD40_rpt SMART 343 381
IPR001680 WD40_rpt SMART 388 446
IPR001680 WD40_rpt ProSiteProfiles 250 280
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 136 447
IPR001680 WD40_rpt ProSiteProfiles 350 380
IPR001680 WD40_rpt Pfam 210 239
IPR001680 WD40_rpt Pfam 245 280
IPR001680 WD40_rpt Pfam 300 335
IPR001680 WD40_rpt Pfam 348 380
IPR001680 WD40_rpt Pfam 391 446
IPR020472 G-protein_beta_WD-40_rep PRINTS 227 241
IPR020472 G-protein_beta_WD-40_rep PRINTS 433 447
IPR020472 G-protein_beta_WD-40_rep PRINTS 368 382
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 16 287
IPR045182 JINGUBANG-like PANTHER 38 447
IPR001680 WD40_rpt ProSiteProfiles 208 249
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 136 447
IPR001680 WD40_rpt SMART 124 166
IPR001680 WD40_rpt SMART 297 336
IPR001680 WD40_rpt SMART 201 240
IPR001680 WD40_rpt SMART 343 381
IPR001680 WD40_rpt SMART 243 281
IPR001680 WD40_rpt SMART 388 446
IPR001680 WD40_rpt Pfam 245 280
IPR001680 WD40_rpt Pfam 391 446
IPR001680 WD40_rpt Pfam 210 239
IPR001680 WD40_rpt Pfam 300 335
IPR001680 WD40_rpt Pfam 348 380
IPR001680 WD40_rpt ProSiteProfiles 208 249
IPR001680 WD40_rpt ProSiteProfiles 304 345
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 16 287
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 288 451
IPR001680 WD40_rpt ProSiteProfiles 350 380
IPR020472 G-protein_beta_WD-40_rep PRINTS 227 241
IPR020472 G-protein_beta_WD-40_rep PRINTS 433 447
IPR020472 G-protein_beta_WD-40_rep PRINTS 368 382
IPR001680 WD40_rpt ProSiteProfiles 250 280
IPR045182 JINGUBANG-like PANTHER 6 450

No CAZYmes available for this sequence

No external refs found!