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  5. Zm00001d025817_T041

Zm00001d025817_T041


Description : CLIP-associated protein


Gene families : OG_01_0004007 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004007_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d025817_T041
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d025817_T041
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_217
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_122


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR048491 XMAP215_CLASP_TOG Pfam 14 214
IPR016024 ARM-type_fold SUPERFAMILY 40 234
IPR034085 TOG SMART 2 225
IPR034085 TOG SMART 270 513
IPR034085 TOG SMART 780 1022
IPR034085 TOG SMART 1190 1425
IPR021133 HEAT_type_2 ProSiteProfiles 161 199
IPR011989 ARM-like Gene3D 1215 1392
IPR011989 ARM-like Gene3D 1 223
IPR011989 ARM-like Gene3D 266 506
IPR016024 ARM-type_fold SUPERFAMILY 295 1390
IPR011989 ARM-like Gene3D 795 1017
IPR024395 CLASP_N_dom Pfam 285 500
IPR024395 CLASP_N_dom Pfam 285 500
IPR016024 ARM-type_fold SUPERFAMILY 40 234
IPR000357 HEAT Pfam 161 190
IPR034085 TOG SMART 2 225
IPR034085 TOG SMART 270 513
IPR034085 TOG SMART 780 1022
IPR034085 TOG SMART 1190 1425
IPR016024 ARM-type_fold SUPERFAMILY 295 1390
IPR011989 ARM-like Gene3D 1215 1392
IPR011989 ARM-like Gene3D 1 223
IPR021133 HEAT_type_2 ProSiteProfiles 161 199
IPR011989 ARM-like Gene3D 795 1017
IPR011989 ARM-like Gene3D 266 506

No CAZYmes available for this sequence

No external refs found!