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  5. Zm00001d025844_T001

Zm00001d025844_T001


Description : GC-rich sequence DNA-binding factor-like protein with Tuftelin interacting domain


Gene families : OG_01_0033370 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0033370_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d025844_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d025844_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_53
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_29


Type GO Term Name Evidence Source
BP GO:0000390 spliceosomal complex disassembly ISM GOs from InterProScan
MF GO:0003676 nucleic acid binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR045211 TFP11/STIP/Ntr1 PANTHER 45 167
IPR000467 G_patch_dom Pfam 112 152
IPR000467 G_patch_dom ProSiteProfiles 109 155
IPR000467 G_patch_dom SMART 107 153
IPR022783 GCFC_dom Pfam 230 492
IPR000467 G_patch_dom SMART 107 153
IPR045211 TFP11/STIP/Ntr1 PANTHER 24 541
IPR000467 G_patch_dom ProSiteProfiles 109 155
IPR022783 GCFC_dom Pfam 230 492
IPR000467 G_patch_dom Pfam 112 152

No CAZYmes available for this sequence

No external refs found!