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  5. Zm00001d025846_T001

Zm00001d025846_T001


Description : beta-glucosidase 47


Gene families : OG_01_0005549 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0005549_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d025846_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d025846_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_18
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_167


Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds ISM GOs from InterProScan
BP GO:0005975 carbohydrate metabolic process ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR033132 Glyco_hydro_1_N_CS ProSitePatterns 39 53
IPR017853 Glycoside_hydrolase_SF SUPERFAMILY 30 501
IPR001360 Glyco_hydro_1 Pfam 33 503
IPR001360 Glyco_hydro_1 PRINTS 409 417
IPR001360 Glyco_hydro_1 PRINTS 451 468
IPR001360 Glyco_hydro_1 PRINTS 475 487
IPR001360 Glyco_hydro_1 PRINTS 332 346
IPR001360 Glyco_hydro_1 PRINTS 430 441
IPR001360 Glyco_hydro_1 PANTHER 22 498
IPR001360 Glyco_hydro_1 PRINTS 409 417
IPR001360 Glyco_hydro_1 PRINTS 451 468
IPR001360 Glyco_hydro_1 PRINTS 475 487
IPR001360 Glyco_hydro_1 PRINTS 332 346
IPR001360 Glyco_hydro_1 PRINTS 430 441
IPR001360 Glyco_hydro_1 Pfam 33 503
IPR017853 Glycoside_hydrolase_SF SUPERFAMILY 30 501
IPR033132 Glyco_hydro_1_N_CS ProSitePatterns 39 53
IPR001360 Glyco_hydro_1 PANTHER 9 508
HMM Family HMM Length Query Length e-Value Query Start Query End
GH1 429 520 3.1e-161 32 503
No external refs found!