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  5. Zm00001d026249_T003

Zm00001d026249_T003


Description : villin 4


Gene families : OG_01_0000277 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000277_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d026249_T003 No neighbors in network
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d026249_T003
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_333


Type GO Term Name Evidence Source
MF GO:0003779 actin binding ISM GOs from InterProScan
BP GO:0007010 cytoskeleton organization ISM GOs from InterProScan
MF GO:0051015 actin filament binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR036180 Gelsolin-like_dom_sf SUPERFAMILY 319 497
IPR029006 ADF-H/Gelsolin-like_dom_sf Gene3D 199 318
IPR036886 Villin_headpiece_dom_sf Gene3D 936 1012
IPR007122 Villin/Gelsolin SMART 461 558
IPR007122 Villin/Gelsolin SMART 692 787
IPR007122 Villin/Gelsolin SMART 85 183
IPR007122 Villin/Gelsolin SMART 320 412
IPR007122 Villin/Gelsolin SMART 588 675
IPR007122 Villin/Gelsolin SMART 205 302
IPR003128 Villin_headpiece Pfam 977 1012
IPR029006 ADF-H/Gelsolin-like_dom_sf Gene3D 587 680
IPR007122 Villin/Gelsolin PRINTS 505 523
IPR007122 Villin/Gelsolin PRINTS 391 412
IPR007122 Villin/Gelsolin PRINTS 713 735
IPR007122 Villin/Gelsolin PRINTS 601 621
IPR007122 Villin/Gelsolin PRINTS 538 558
IPR007122 Villin/Gelsolin PRINTS 661 680
IPR007122 Villin/Gelsolin PRINTS 480 496
IPR029006 ADF-H/Gelsolin-like_dom_sf Gene3D 321 422
IPR003128 Villin_headpiece ProSiteProfiles 947 1012
IPR007122 Villin/Gelsolin PANTHER 49 1006
IPR007123 Gelsolin-like_dom Pfam 217 285
IPR007123 Gelsolin-like_dom Pfam 340 405
IPR007123 Gelsolin-like_dom Pfam 94 177
IPR007123 Gelsolin-like_dom Pfam 707 781
IPR029006 ADF-H/Gelsolin-like_dom_sf Gene3D 450 585
IPR029006 ADF-H/Gelsolin-like_dom_sf Gene3D 681 805
IPR029006 ADF-H/Gelsolin-like_dom_sf Gene3D 71 198
IPR003128 Villin_headpiece SMART 977 1012
IPR036886 Villin_headpiece_dom_sf SUPERFAMILY 942 1012
IPR003128 Villin_headpiece Pfam 977 1012
IPR029006 ADF-H/Gelsolin-like_dom_sf Gene3D 681 805
IPR029006 ADF-H/Gelsolin-like_dom_sf Gene3D 321 422
IPR007122 Villin/Gelsolin PRINTS 505 523
IPR007122 Villin/Gelsolin PRINTS 391 412
IPR007122 Villin/Gelsolin PRINTS 713 735
IPR007122 Villin/Gelsolin PRINTS 601 621
IPR007122 Villin/Gelsolin PRINTS 538 558
IPR007122 Villin/Gelsolin PRINTS 661 680
IPR007122 Villin/Gelsolin PRINTS 480 496
IPR007122 Villin/Gelsolin SMART 461 558
IPR007122 Villin/Gelsolin SMART 692 787
IPR007122 Villin/Gelsolin SMART 85 183
IPR007122 Villin/Gelsolin SMART 320 412
IPR007122 Villin/Gelsolin SMART 588 675
IPR007122 Villin/Gelsolin SMART 205 302
IPR003128 Villin_headpiece SMART 977 1012
IPR036886 Villin_headpiece_dom_sf Gene3D 936 1012
IPR029006 ADF-H/Gelsolin-like_dom_sf Gene3D 199 318
IPR007122 Villin/Gelsolin PANTHER 65 1012
IPR029006 ADF-H/Gelsolin-like_dom_sf Gene3D 71 198
IPR029006 ADF-H/Gelsolin-like_dom_sf Gene3D 587 680
IPR036180 Gelsolin-like_dom_sf SUPERFAMILY 319 497
IPR003128 Villin_headpiece ProSiteProfiles 947 1012
IPR007123 Gelsolin-like_dom Pfam 218 285
IPR007123 Gelsolin-like_dom Pfam 94 177
IPR007123 Gelsolin-like_dom Pfam 340 405
IPR007123 Gelsolin-like_dom Pfam 707 781
IPR029006 ADF-H/Gelsolin-like_dom_sf Gene3D 450 585
IPR036886 Villin_headpiece_dom_sf SUPERFAMILY 942 1012

No CAZYmes available for this sequence

No external refs found!