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  5. Zm00001d026291_T013

Zm00001d026291_T013


Description : chromomethylase 3


Gene families : OG_01_0000383 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000383_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d026291_T013
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d026291_T013
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_94
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_125


Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding ISM GOs from InterProScan
MF GO:0008168 methyltransferase activity ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001025 BAH_dom SMART 187 312
IPR023780 Chromo_domain Pfam 444 497
IPR029063 SAM-dependent_MTases_sf Gene3D 346 886
IPR029063 SAM-dependent_MTases_sf SUPERFAMILY 344 868
IPR018117 C5_DNA_meth_AS ProSitePatterns 512 524
IPR016197 Chromo-like_dom_sf SUPERFAMILY 431 505
IPR001525 C5_MeTfrase Pfam 501 866
IPR001525 C5_MeTfrase PRINTS 555 569
IPR001525 C5_MeTfrase PRINTS 601 614
IPR001525 C5_MeTfrase PRINTS 345 361
IPR001525 C5_MeTfrase ProSiteProfiles 344 875
IPR001025 BAH_dom Pfam 189 310
IPR001025 BAH_dom ProSiteProfiles 187 312
IPR043151 BAH_sf Gene3D 132 297
IPR000953 Chromo/chromo_shadow_dom ProSiteProfiles 444 498
IPR000953 Chromo/chromo_shadow_dom SMART 443 500
IPR001025 BAH_dom ProSiteProfiles 187 312
IPR001025 BAH_dom Pfam 188 310
IPR043151 BAH_sf Gene3D 132 297
IPR000953 Chromo/chromo_shadow_dom ProSiteProfiles 444 498
IPR016197 Chromo-like_dom_sf SUPERFAMILY 431 505
IPR018117 C5_DNA_meth_AS ProSitePatterns 512 524
IPR001525 C5_MeTfrase Pfam 501 865
IPR000953 Chromo/chromo_shadow_dom SMART 443 500
IPR001525 C5_MeTfrase ProSiteProfiles 344 875
IPR001525 C5_MeTfrase PRINTS 555 569
IPR001525 C5_MeTfrase PRINTS 601 614
IPR001525 C5_MeTfrase PRINTS 345 361
IPR001025 BAH_dom SMART 187 312
IPR029063 SAM-dependent_MTases_sf SUPERFAMILY 344 868
IPR023780 Chromo_domain Pfam 444 497

No CAZYmes available for this sequence

No external refs found!