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  5. Zm00001d026358_T001

Zm00001d026358_T001


Description : BED zinc finger ;hAT family dimerisation domain


Gene families : OG_01_0001085 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001085_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d026358_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d026358_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_250
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_205


Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISM GOs from InterProScan
MF GO:0046983 protein dimerization activity ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR012337 RNaseH-like_sf SUPERFAMILY 262 600
IPR008906 HATC_C_dom Pfam 517 599
IPR036236 Znf_C2H2_sf SUPERFAMILY 143 191
IPR003656 Znf_BED ProSiteProfiles 140 201
IPR036236 Znf_C2H2_sf SUPERFAMILY 44 92
IPR045259 DAYSLEEPER-like PANTHER 192 600
IPR025525 hAT-like_transposase_RNase-H Pfam 375 474
IPR003656 Znf_BED ProSiteProfiles 41 96
IPR036236 Znf_C2H2_sf SUPERFAMILY 44 92
IPR012337 RNaseH-like_sf SUPERFAMILY 262 600
IPR036236 Znf_C2H2_sf SUPERFAMILY 143 191
IPR003656 Znf_BED ProSiteProfiles 41 96
IPR025525 hAT-like_transposase_RNase-H Pfam 375 474
IPR008906 HATC_C_dom Pfam 517 599
IPR045259 DAYSLEEPER-like PANTHER 225 599
IPR045259 DAYSLEEPER-like PANTHER 43 103
IPR045259 DAYSLEEPER-like PANTHER 120 225
IPR003656 Znf_BED ProSiteProfiles 140 201

No CAZYmes available for this sequence

No external refs found!