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  5. Zm00001d026397_T001

Zm00001d026397_T001


Description : UBP1-associated protein 2A


Gene families : OG_01_0005257 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0005257_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d026397_T001 No neighbors in network
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d026397_T001
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_227


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISM GOs from InterProScan
MF GO:0003723 RNA binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 194 323
IPR035979 RBD_domain_sf SUPERFAMILY 106 212
IPR000504 RRM_dom SMART 112 184
IPR000504 RRM_dom SMART 232 304
IPR035979 RBD_domain_sf SUPERFAMILY 203 317
IPR000504 RRM_dom ProSiteProfiles 111 188
IPR000504 RRM_dom Pfam 233 301
IPR000504 RRM_dom Pfam 113 171
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 43 193
IPR000504 RRM_dom ProSiteProfiles 231 308
IPR035979 RBD_domain_sf SUPERFAMILY 106 212
IPR000504 RRM_dom ProSiteProfiles 111 188
IPR035979 RBD_domain_sf SUPERFAMILY 203 317
IPR000504 RRM_dom ProSiteProfiles 231 308
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 194 323
IPR000504 RRM_dom SMART 112 184
IPR000504 RRM_dom SMART 232 304
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 43 193
IPR000504 RRM_dom Pfam 113 171
IPR000504 RRM_dom Pfam 233 301

No CAZYmes available for this sequence

No external refs found!