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  5. Zm00001d026532_T007

Zm00001d026532_T007


Description : Regulator of chromosome condensation (RCC1) family protein


Gene families : OG_01_0005144 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0005144_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d026532_T007
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d026532_T007
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_262
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_191


Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR000408 Reg_chr_condens ProSiteProfiles 359 404
IPR009091 RCC1/BLIP-II SUPERFAMILY 33 457
IPR009091 RCC1/BLIP-II Gene3D 337 498
IPR000408 Reg_chr_condens PRINTS 125 138
IPR000408 Reg_chr_condens PRINTS 91 107
IPR000408 Reg_chr_condens PRINTS 263 277
IPR000408 Reg_chr_condens PRINTS 144 160
IPR000408 Reg_chr_condens PRINTS 247 263
IPR017956 AT_hook_DNA-bd_motif PRINTS 581 591
IPR017956 AT_hook_DNA-bd_motif PRINTS 543 553
IPR017956 AT_hook_DNA-bd_motif PRINTS 559 570
IPR000408 Reg_chr_condens ProSitePatterns 247 257
IPR000408 Reg_chr_condens ProSiteProfiles 195 260
IPR028641 RCC2 PANTHER 17 316
IPR009091 RCC1/BLIP-II Gene3D 25 326
IPR000408 Reg_chr_condens ProSiteProfiles 261 316
IPR000408 Reg_chr_condens ProSiteProfiles 404 457
IPR000408 Reg_chr_condens ProSiteProfiles 90 141
IPR000408 Reg_chr_condens ProSiteProfiles 142 192
IPR000408 Reg_chr_condens Pfam 260 296
IPR000408 Reg_chr_condens Pfam 90 138
IPR000408 Reg_chr_condens Pfam 405 452
IPR000408 Reg_chr_condens Pfam 141 187
IPR000408 Reg_chr_condens Pfam 198 257
IPR009091 RCC1/BLIP-II Gene3D 337 498
IPR028641 RCC2 PANTHER 355 575
IPR028641 RCC2 PANTHER 1 325
IPR000408 Reg_chr_condens ProSiteProfiles 261 316
IPR009091 RCC1/BLIP-II SUPERFAMILY 33 457
IPR000408 Reg_chr_condens PRINTS 125 138
IPR000408 Reg_chr_condens PRINTS 91 107
IPR000408 Reg_chr_condens PRINTS 263 277
IPR000408 Reg_chr_condens PRINTS 144 160
IPR000408 Reg_chr_condens PRINTS 247 263
IPR000408 Reg_chr_condens ProSiteProfiles 404 457
IPR000408 Reg_chr_condens ProSitePatterns 247 257
IPR017956 AT_hook_DNA-bd_motif PRINTS 581 591
IPR017956 AT_hook_DNA-bd_motif PRINTS 543 553
IPR017956 AT_hook_DNA-bd_motif PRINTS 559 570
IPR000408 Reg_chr_condens Pfam 141 187
IPR000408 Reg_chr_condens Pfam 198 257
IPR000408 Reg_chr_condens Pfam 260 298
IPR000408 Reg_chr_condens Pfam 90 138
IPR000408 Reg_chr_condens Pfam 407 452
IPR000408 Reg_chr_condens ProSiteProfiles 142 192
IPR000408 Reg_chr_condens ProSiteProfiles 195 260
IPR000408 Reg_chr_condens ProSiteProfiles 90 141
IPR000408 Reg_chr_condens ProSiteProfiles 359 404
IPR009091 RCC1/BLIP-II Gene3D 25 326

No CAZYmes available for this sequence

No external refs found!