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Description : Transducin/WD40 repeat-like superfamily protein
Gene families : OG_01_0010441 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0010441_tree
Sequence : cds (download), rna (download), protein (download)
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d026627_T001 | |
| Neighborhood | Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d026627_T001 | |
| Cluster | Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_166 | |
| Cluster | Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_672 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | ISM | GOs from InterProScan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Source | Start | Stop |
|---|---|---|---|---|
| IPR020472 | G-protein_beta_WD-40_rep | PRINTS | 440 | 454 |
| IPR020472 | G-protein_beta_WD-40_rep | PRINTS | 482 | 496 |
| IPR020472 | G-protein_beta_WD-40_rep | PRINTS | 324 | 338 |
| IPR036322 | WD40_repeat_dom_sf | SUPERFAMILY | 299 | 633 |
| IPR019775 | WD40_repeat_CS | ProSitePatterns | 324 | 338 |
| IPR001680 | WD40_rpt | SMART | 589 | 630 |
| IPR001680 | WD40_rpt | SMART | 497 | 536 |
| IPR001680 | WD40_rpt | SMART | 548 | 588 |
| IPR001680 | WD40_rpt | SMART | 298 | 337 |
| IPR001680 | WD40_rpt | SMART | 456 | 495 |
| IPR001680 | WD40_rpt | SMART | 415 | 453 |
| IPR019775 | WD40_repeat_CS | ProSitePatterns | 440 | 454 |
| IPR001680 | WD40_rpt | ProSiteProfiles | 305 | 346 |
| IPR040324 | WDR44/Dgr2 | PANTHER | 23 | 774 |
| IPR001680 | WD40_rpt | ProSiteProfiles | 422 | 462 |
| IPR001680 | WD40_rpt | ProSiteProfiles | 462 | 497 |
| IPR015943 | WD40/YVTN_repeat-like_dom_sf | Gene3D | 389 | 680 |
| IPR015943 | WD40/YVTN_repeat-like_dom_sf | Gene3D | 276 | 380 |
| IPR001680 | WD40_rpt | Pfam | 606 | 629 |
| IPR001680 | WD40_rpt | Pfam | 303 | 336 |
| IPR001680 | WD40_rpt | Pfam | 458 | 495 |
| IPR001680 | WD40_rpt | Pfam | 417 | 453 |
| IPR001680 | WD40_rpt | Pfam | 508 | 536 |
| IPR001680 | WD40_rpt | SMART | 589 | 630 |
| IPR001680 | WD40_rpt | SMART | 497 | 536 |
| IPR001680 | WD40_rpt | SMART | 548 | 588 |
| IPR001680 | WD40_rpt | SMART | 298 | 337 |
| IPR001680 | WD40_rpt | SMART | 456 | 495 |
| IPR001680 | WD40_rpt | SMART | 415 | 453 |
| IPR020472 | G-protein_beta_WD-40_rep | PRINTS | 440 | 454 |
| IPR020472 | G-protein_beta_WD-40_rep | PRINTS | 482 | 496 |
| IPR020472 | G-protein_beta_WD-40_rep | PRINTS | 324 | 338 |
| IPR019775 | WD40_repeat_CS | ProSitePatterns | 440 | 454 |
| IPR040324 | WDR44/Dgr2 | PANTHER | 9 | 775 |
| IPR015943 | WD40/YVTN_repeat-like_dom_sf | Gene3D | 276 | 380 |
| IPR019775 | WD40_repeat_CS | ProSitePatterns | 324 | 338 |
| IPR001680 | WD40_rpt | ProSiteProfiles | 305 | 346 |
| IPR036322 | WD40_repeat_dom_sf | SUPERFAMILY | 299 | 633 |
| IPR001680 | WD40_rpt | Pfam | 303 | 336 |
| IPR001680 | WD40_rpt | Pfam | 606 | 629 |
| IPR001680 | WD40_rpt | Pfam | 458 | 495 |
| IPR001680 | WD40_rpt | Pfam | 417 | 453 |
| IPR001680 | WD40_rpt | ProSiteProfiles | 422 | 462 |
| IPR001680 | WD40_rpt | ProSiteProfiles | 462 | 497 |
| IPR015943 | WD40/YVTN_repeat-like_dom_sf | Gene3D | 389 | 680 |
No CAZYmes available for this sequence
| No external refs found! |