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  5. Zm00001d026658_T001

Zm00001d026658_T001


Description : Pentatricopeptide repeat (PPR) superfamily protein


Gene families : OG_01_0013450 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0013450_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d026658_T001
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_94


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR046848 E_motif Pfam 163 209
IPR002885 Pentatricopeptide_rpt Pfam 35 61
IPR002885 Pentatricopeptide_rpt Pfam 65 91
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 179 213
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 63 97
IPR011990 TPR-like_helical_dom_sf Gene3D 4 94
IPR011990 TPR-like_helical_dom_sf Gene3D 104 214
IPR002885 Pentatricopeptide_rpt NCBIfam 65 91
IPR011990 TPR-like_helical_dom_sf Gene3D 104 214
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 63 97
IPR011990 TPR-like_helical_dom_sf Gene3D 4 94
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 179 213
IPR002885 Pentatricopeptide_rpt TIGRFAM 65 91
IPR002885 Pentatricopeptide_rpt Pfam 35 61
IPR002885 Pentatricopeptide_rpt Pfam 65 91

No CAZYmes available for this sequence

No external refs found!