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  5. Zm00001d027371_T001

Zm00001d027371_T001


Description : TCP-1/cpn60 chaperonin family protein


Gene families : OG_01_0012497 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0012497_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d027371_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d027371_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_228
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_127


Type GO Term Name Evidence Source
MF GO:0005524 ATP binding ISM GOs from InterProScan
BP GO:0006457 protein folding ISM GOs from InterProScan
MF GO:0016887 ATP hydrolysis activity ISM GOs from InterProScan
MF GO:0051082 unfolded protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR027413 GROEL-like_equatorial_sf Gene3D 34 532
IPR027409 GroEL-like_apical_dom_sf Gene3D 220 379
IPR017998 Chaperone_TCP-1 PANTHER 19 534
IPR027409 GroEL-like_apical_dom_sf SUPERFAMILY 215 388
IPR012717 Chap_CCT_delta NCBIfam 19 534
IPR002423 Cpn60/GroEL/TCP-1 Pfam 37 533
IPR027410 TCP-1-like_intermed_sf Gene3D 149 415
IPR027413 GROEL-like_equatorial_sf SUPERFAMILY 19 533
IPR017998 Chaperone_TCP-1 PRINTS 383 405
IPR017998 Chaperone_TCP-1 PRINTS 63 81
IPR017998 Chaperone_TCP-1 PRINTS 93 112
IPR017998 Chaperone_TCP-1 PRINTS 39 55
IPR017998 Chaperone_TCP-1 PRINTS 417 429
IPR002194 Chaperonin_TCP-1_CS ProSitePatterns 42 54
IPR027410 TCP-1-like_intermed_sf SUPERFAMILY 152 413
IPR012717 Chap_CCT_delta CDD 18 534
IPR002194 Chaperonin_TCP-1_CS ProSitePatterns 93 101
IPR002194 Chaperonin_TCP-1_CS ProSitePatterns 42 54
IPR012717 Chap_CCT_delta CDD 18 534
IPR027409 GroEL-like_apical_dom_sf SUPERFAMILY 215 388
IPR002423 Cpn60/GroEL/TCP-1 Pfam 37 533
IPR012717 Chap_CCT_delta TIGRFAM 19 534
IPR027413 GROEL-like_equatorial_sf Gene3D 34 532
IPR017998 Chaperone_TCP-1 PANTHER 14 533
IPR002194 Chaperonin_TCP-1_CS ProSitePatterns 93 101
IPR017998 Chaperone_TCP-1 PRINTS 383 405
IPR017998 Chaperone_TCP-1 PRINTS 63 81
IPR017998 Chaperone_TCP-1 PRINTS 93 112
IPR017998 Chaperone_TCP-1 PRINTS 39 55
IPR017998 Chaperone_TCP-1 PRINTS 417 429
IPR027410 TCP-1-like_intermed_sf Gene3D 149 415
IPR027413 GROEL-like_equatorial_sf SUPERFAMILY 19 533
IPR027410 TCP-1-like_intermed_sf SUPERFAMILY 152 413
IPR027409 GroEL-like_apical_dom_sf Gene3D 220 379

No CAZYmes available for this sequence

No external refs found!