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  5. Zm00001d027386_T002

Zm00001d027386_T002


Description : phospholipase D beta 1


Gene families : OG_01_0006121 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0006121_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d027386_T002
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d027386_T002
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_99
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_371


Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity ISM GOs from InterProScan
MF GO:0004630 phospholipase D activity ISM GOs from InterProScan
MF GO:0005509 calcium ion binding ISM GOs from InterProScan
CC GO:0016020 membrane ISM GOs from InterProScan
BP GO:0046470 phosphatidylcholine metabolic process ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001736 PLipase_D/transphosphatidylase SMART 680 707
IPR001736 PLipase_D/transphosphatidylase SMART 345 380
IPR035892 C2_domain_sf SUPERFAMILY 25 165
IPR024632 PLipase_D_C Pfam 754 824
IPR001736 PLipase_D/transphosphatidylase Pfam 684 707
IPR001736 PLipase_D/transphosphatidylase Pfam 347 380
IPR015679 PLipase_D_fam PANTHER 25 822
IPR000008 C2_dom SMART 29 139
IPR001736 PLipase_D/transphosphatidylase ProSiteProfiles 680 707
IPR035892 C2_domain_sf Gene3D 24 150
IPR011402 PLipase_D_pln PIRSF 15 834
IPR000008 C2_dom Pfam 28 141
IPR001736 PLipase_D/transphosphatidylase ProSiteProfiles 345 380
IPR000008 C2_dom ProSiteProfiles 10 140
IPR011402 PLipase_D_pln PIRSF 15 834
IPR001736 PLipase_D/transphosphatidylase ProSiteProfiles 680 707
IPR015679 PLipase_D_fam PANTHER 5 834
IPR001736 PLipase_D/transphosphatidylase SMART 680 707
IPR001736 PLipase_D/transphosphatidylase SMART 345 380
IPR035892 C2_domain_sf SUPERFAMILY 25 165
IPR000008 C2_dom SMART 29 139
IPR001736 PLipase_D/transphosphatidylase ProSiteProfiles 345 380
IPR000008 C2_dom ProSiteProfiles 10 140
IPR001736 PLipase_D/transphosphatidylase Pfam 346 380
IPR001736 PLipase_D/transphosphatidylase Pfam 683 707
IPR000008 C2_dom Pfam 28 142
IPR035892 C2_domain_sf Gene3D 24 150
IPR024632 PLipase_D_C Pfam 754 824

No CAZYmes available for this sequence

No external refs found!