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Description : Calcium-binding EF hand family protein
Gene families : OG_01_0004138 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004138_tree
Sequence : cds (download), rna (download), protein (download)
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d027503_T036 | |
| Neighborhood | Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d027503_T036 | |
| Cluster | Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_296 | |
| Cluster | Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_252 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005509 | calcium ion binding | ISM | GOs from InterProScan |
| MF | GO:0005515 | protein binding | ISM | GOs from InterProScan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Source | Start | Stop |
|---|---|---|---|---|
| IPR000261 | EH_dom | CDD | 422 | 488 |
| IPR002048 | EF_hand_dom | ProSiteProfiles | 42 | 72 |
| IPR000261 | EH_dom | ProSiteProfiles | 418 | 500 |
| IPR011992 | EF-hand-dom_pair | SUPERFAMILY | 409 | 502 |
| IPR002048 | EF_hand_dom | SMART | 7 | 35 |
| IPR002048 | EF_hand_dom | SMART | 421 | 449 |
| IPR002048 | EF_hand_dom | SMART | 41 | 69 |
| IPR002048 | EF_hand_dom | SMART | 455 | 483 |
| IPR018247 | EF_Hand_1_Ca_BS | ProSitePatterns | 464 | 476 |
| IPR000261 | EH_dom | CDD | 8 | 74 |
| IPR000261 | EH_dom | ProSiteProfiles | 4 | 94 |
| IPR002048 | EF_hand_dom | Pfam | 9 | 27 |
| IPR000261 | EH_dom | Pfam | 412 | 483 |
| IPR002048 | EF_hand_dom | ProSiteProfiles | 451 | 486 |
| IPR011992 | EF-hand-dom_pair | SUPERFAMILY | 6 | 88 |
| IPR002048 | EF_hand_dom | ProSiteProfiles | 3 | 38 |
| IPR000261 | EH_dom | SMART | 2 | 92 |
| IPR000261 | EH_dom | SMART | 411 | 506 |
| IPR018247 | EF_Hand_1_Ca_BS | ProSitePatterns | 50 | 62 |
| IPR002048 | EF_hand_dom | ProSiteProfiles | 3 | 38 |
| IPR000261 | EH_dom | Pfam | 412 | 483 |
| IPR002048 | EF_hand_dom | ProSiteProfiles | 42 | 72 |
| IPR000261 | EH_dom | CDD | 422 | 488 |
| IPR000261 | EH_dom | SMART | 2 | 92 |
| IPR000261 | EH_dom | SMART | 411 | 506 |
| IPR000261 | EH_dom | ProSiteProfiles | 4 | 94 |
| IPR018247 | EF_Hand_1_Ca_BS | ProSitePatterns | 50 | 62 |
| IPR018247 | EF_Hand_1_Ca_BS | ProSitePatterns | 464 | 476 |
| IPR011992 | EF-hand-dom_pair | SUPERFAMILY | 409 | 502 |
| IPR000261 | EH_dom | CDD | 8 | 74 |
| IPR002048 | EF_hand_dom | ProSiteProfiles | 451 | 486 |
| IPR002048 | EF_hand_dom | SMART | 7 | 35 |
| IPR002048 | EF_hand_dom | SMART | 421 | 449 |
| IPR002048 | EF_hand_dom | SMART | 41 | 69 |
| IPR002048 | EF_hand_dom | SMART | 455 | 483 |
| IPR002048 | EF_hand_dom | Pfam | 9 | 27 |
| IPR000261 | EH_dom | ProSiteProfiles | 418 | 500 |
| IPR011992 | EF-hand-dom_pair | SUPERFAMILY | 6 | 88 |
No CAZYmes available for this sequence
| No external refs found! |