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  5. Zm00001d027506_T003

Zm00001d027506_T003


Description : DNA-binding bromodomain-containing protein


Gene families : OG_01_0014177 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0014177_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d027506_T003
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d027506_T003
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_287
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_105


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001487 Bromodomain ProSiteProfiles 134 204
IPR036427 Bromodomain-like_sf Gene3D 121 234
IPR018359 Bromodomain_CS ProSitePatterns 140 196
IPR001487 Bromodomain SMART 115 223
IPR001487 Bromodomain PRINTS 167 185
IPR001487 Bromodomain PRINTS 137 150
IPR001487 Bromodomain PRINTS 151 167
IPR001487 Bromodomain PRINTS 185 204
IPR036427 Bromodomain-like_sf SUPERFAMILY 122 229
IPR001487 Bromodomain Pfam 127 208
IPR001487 Bromodomain PRINTS 167 185
IPR001487 Bromodomain PRINTS 137 150
IPR001487 Bromodomain PRINTS 151 167
IPR001487 Bromodomain PRINTS 185 204
IPR001487 Bromodomain SMART 115 223
IPR001487 Bromodomain ProSiteProfiles 134 204
IPR036427 Bromodomain-like_sf SUPERFAMILY 122 229
IPR001487 Bromodomain Pfam 129 208
IPR036427 Bromodomain-like_sf Gene3D 121 234
IPR018359 Bromodomain_CS ProSitePatterns 140 196

No CAZYmes available for this sequence

No external refs found!