- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : ubiquitin family protein
Gene families : OG_01_0002916 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002916_tree
Sequence : cds (download), rna (download), protein (download)
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d027514_T002 | |
| Neighborhood | Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d027514_T002 | |
| Cluster | Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_85 | |
| Cluster | Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_272 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | ISM | GOs from InterProScan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Source | Start | Stop |
|---|---|---|---|---|
| IPR000626 | Ubiquitin-like_dom | Pfam | 19 | 87 |
| IPR015940 | UBA | ProSiteProfiles | 489 | 533 |
| IPR015496 | Ubiquilin | PANTHER | 11 | 532 |
| IPR015940 | UBA | SMART | 494 | 532 |
| IPR029071 | Ubiquitin-like_domsf | SUPERFAMILY | 8 | 99 |
| IPR019954 | Ubiquitin_CS | ProSitePatterns | 43 | 68 |
| IPR000626 | Ubiquitin-like_dom | SMART | 17 | 88 |
| IPR015940 | UBA | Pfam | 494 | 530 |
| IPR006636 | STI1_HS-bd | SMART | 397 | 432 |
| IPR006636 | STI1_HS-bd | SMART | 132 | 173 |
| IPR006636 | STI1_HS-bd | SMART | 319 | 393 |
| IPR006636 | STI1_HS-bd | SMART | 186 | 225 |
| IPR000626 | Ubiquitin-like_dom | ProSiteProfiles | 17 | 86 |
| IPR009060 | UBA-like_sf | SUPERFAMILY | 490 | 532 |
| IPR000626 | Ubiquitin-like_dom | ProSiteProfiles | 17 | 86 |
| IPR019954 | Ubiquitin_CS | ProSitePatterns | 43 | 68 |
| IPR015940 | UBA | ProSiteProfiles | 489 | 533 |
| IPR015940 | UBA | Pfam | 494 | 530 |
| IPR000626 | Ubiquitin-like_dom | Pfam | 20 | 86 |
| IPR029071 | Ubiquitin-like_domsf | SUPERFAMILY | 8 | 99 |
| IPR015940 | UBA | SMART | 494 | 532 |
| IPR006636 | STI1_HS-bd | SMART | 397 | 432 |
| IPR006636 | STI1_HS-bd | SMART | 132 | 173 |
| IPR006636 | STI1_HS-bd | SMART | 319 | 393 |
| IPR006636 | STI1_HS-bd | SMART | 186 | 225 |
| IPR000626 | Ubiquitin-like_dom | SMART | 17 | 88 |
| IPR009060 | UBA-like_sf | SUPERFAMILY | 490 | 532 |
No CAZYmes available for this sequence
| No external refs found! |