Zm00001d027519_T001

Description : OPC-8:0 CoA ligase1

Gene families : OG_01_0005686 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0005686_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d027519_T001
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d027519_T001
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_214
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_8

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR025110	AMP-bd_C	Pfam	460	535
IPR042099	ANL_N_sf	Gene3D	12	445
IPR000873	AMP-dep_Synth/Lig_com	Pfam	42	409
IPR045851	AMP-bd_C_sf	Gene3D	446	549
IPR020845	AMP-binding_CS	ProSitePatterns	201	212
IPR000873	AMP-dep_Synth/Lig_com	Pfam	42	451
IPR020845	AMP-binding_CS	ProSitePatterns	201	212
IPR042099	ANL_N_sf	Gene3D	12	445
IPR045851	AMP-bd_C_sf	Gene3D	446	549
IPR025110	AMP-bd_C	Pfam	460	535

No CAZYmes available for this sequence

External Links

No external refs found!