Zm00001d027657_T001

Description : RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain

Gene families : OG_01_0008514 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0008514_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d027657_T001	No neighbors in network
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d027657_T001
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_102

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	ISM	GOs from InterProScan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR001878	Znf_CCHC	ProSiteProfiles	128	144
IPR036875	Znf_CCHC_sf	SUPERFAMILY	108	146
IPR042509	ZCCHC3	PANTHER	23	468
IPR001878	Znf_CCHC	SMART	109	125
IPR001878	Znf_CCHC	SMART	128	144
IPR001878	Znf_CCHC	ProSiteProfiles	128	144
IPR036875	Znf_CCHC_sf	SUPERFAMILY	108	146
IPR001878	Znf_CCHC	SMART	109	125
IPR001878	Znf_CCHC	SMART	128	144

No CAZYmes available for this sequence

External Links

No external refs found!