Zm00001d027711_T003

Description : AMP-dependent synthetase and ligase family protein

Gene families : OG_01_0001522 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001522_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d027711_T003
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d027711_T003
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_227
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_104

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR045851	AMP-bd_C_sf	Gene3D	452	553
IPR025110	AMP-bd_C	Pfam	465	540
IPR020845	AMP-binding_CS	ProSitePatterns	205	216
IPR042099	ANL_N_sf	Gene3D	14	451
IPR000873	AMP-dep_Synth/Lig_com	Pfam	39	415
IPR020845	AMP-binding_CS	ProSitePatterns	205	216
IPR000873	AMP-dep_Synth/Lig_com	Pfam	39	456
IPR042099	ANL_N_sf	Gene3D	14	451
IPR025110	AMP-bd_C	Pfam	465	540
IPR045851	AMP-bd_C_sf	Gene3D	452	553

No CAZYmes available for this sequence

External Links

No external refs found!