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  5. Zm00001d027748_T002

Zm00001d027748_T002


Description : P-loop containing nucleoside triphosphate hydrolases superfamily protein


Gene families : OG_01_0010234 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0010234_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d027748_T002
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d027748_T002
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_221
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_205


Type GO Term Name Evidence Source
MF GO:0004386 helicase activity ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR041679 DNA2/NAM7-like_C Pfam 595 792
IPR041677 DNA2/NAM7_AAA_11 Pfam 394 481
IPR041677 DNA2/NAM7_AAA_11 Pfam 510 580
IPR027417 P-loop_NTPase Gene3D 345 487
IPR027417 P-loop_NTPase Gene3D 506 605
IPR045055 DNA2/NAM7-like PANTHER 298 860
IPR027417 P-loop_NTPase Gene3D 620 818
IPR026122 MOV-10/SDE3_DEXXQ/H-box CDD 396 620
IPR049080 MOV-10-like_beta-barrel Pfam 267 348
IPR027417 P-loop_NTPase SUPERFAMILY 387 802
IPR047187 SF1_C_Upf1 CDD 621 809
IPR041677 DNA2/NAM7_AAA_11 Pfam 510 579
IPR041677 DNA2/NAM7_AAA_11 Pfam 395 481
IPR027417 P-loop_NTPase Gene3D 620 818
IPR045055 DNA2/NAM7-like PANTHER 1 830
IPR041679 DNA2/NAM7-like_C Pfam 592 793
IPR041679 DNA2/NAM7-like_C CDD 621 809
IPR027417 P-loop_NTPase Gene3D 345 487
IPR027417 P-loop_NTPase Gene3D 506 605
IPR027417 P-loop_NTPase SUPERFAMILY 387 802

No CAZYmes available for this sequence

No external refs found!