Zm00001d027925_T001

Description : Integrase-type DNA-binding superfamily protein

Gene families : OG_01_0015671 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0015671_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d027925_T001
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d027925_T001
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_248
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_64

Type	GO Term	Name	Evidence	Source
BP	GO:0000160	phosphorelay signal transduction system	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISM	GOs from InterProScan
MF	GO:0003700	DNA-binding transcription factor activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	ISM	GOs from InterProScan
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009755	hormone-mediated signaling pathway	None	Extended
BP	GO:0009873	ethylene-activated signaling pathway	ISM	GOs from InterProScan
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0035556	intracellular signal transduction	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR016177	DNA-bd_dom_sf	SUPERFAMILY	101	159
IPR001471	AP2/ERF_dom	SMART	101	164
IPR001471	AP2/ERF_dom	Pfam	102	150
IPR001471	AP2/ERF_dom	CDD	101	160
IPR001471	AP2/ERF_dom	PRINTS	102	113
IPR001471	AP2/ERF_dom	PRINTS	124	140
IPR036955	AP2/ERF_dom_sf	Gene3D	100	160
IPR001471	AP2/ERF_dom	ProSiteProfiles	101	158
IPR044808	ERF_plant	PANTHER	58	236
IPR001471	AP2/ERF_dom	PRINTS	102	113
IPR001471	AP2/ERF_dom	PRINTS	124	140
IPR001471	AP2/ERF_dom	SMART	101	164
IPR001471	AP2/ERF_dom	Pfam	102	150
IPR036955	AP2/ERF_dom_sf	Gene3D	100	160
IPR001471	AP2/ERF_dom	ProSiteProfiles	101	158
IPR044808	ERF_plant	PANTHER	4	324
IPR001471	AP2/ERF_dom	CDD	101	160
IPR016177	DNA-bd_dom_sf	SUPERFAMILY	101	159

No CAZYmes available for this sequence

External Links

No external refs found!

Zm00001d027925_T001

Expression Profile

Co-expression Networks

Functional Annotation