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  5. Zm00001d027975_T001

Zm00001d027975_T001


Description : RNI-like superfamily protein


Gene families : OG_01_0010839 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0010839_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d027975_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d027975_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_252
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_59


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR041567 COI1_F-box Pfam 21 60
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 504 528
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 479 503
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 146 171
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 455 478
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 120 144
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 395 419
IPR032675 LRR_dom_sf Gene3D 61 598
IPR036047 F-box-like_dom_sf SUPERFAMILY 13 54
IPR041101 Transp_inhibit Pfam 80 128
IPR001611 Leu-rich_rpt Pfam 504 524
IPR001611 Leu-rich_rpt Pfam 504 524
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 504 528
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 479 503
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 146 171
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 455 478
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 120 144
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 395 419
IPR032675 LRR_dom_sf Gene3D 61 598
IPR041567 COI1_F-box Pfam 21 60
IPR036047 F-box-like_dom_sf SUPERFAMILY 13 54
IPR041101 Transp_inhibit Pfam 80 128

No CAZYmes available for this sequence

No external refs found!