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Description : Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains
Gene families : OG_01_0004692 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004692_tree
Sequence : cds (download), rna (download), protein (download)
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d028007_T004 | |
| Neighborhood | Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d028007_T004 | |
| Cluster | Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_35 | |
| Cluster | Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_135 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | ISM | GOs from InterProScan |
| MF | GO:0005515 | protein binding | ISM | GOs from InterProScan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Source | Start | Stop |
|---|---|---|---|---|
| IPR005559 | CG-1_dom | Pfam | 21 | 134 |
| IPR002110 | Ankyrin_rpt | ProSiteProfiles | 641 | 673 |
| IPR002110 | Ankyrin_rpt | ProSiteProfiles | 674 | 706 |
| IPR005559 | CG-1_dom | SMART | 18 | 136 |
| IPR002110 | Ankyrin_rpt | SMART | 674 | 703 |
| IPR002110 | Ankyrin_rpt | SMART | 713 | 742 |
| IPR002110 | Ankyrin_rpt | SMART | 641 | 670 |
| IPR000048 | IQ_motif_EF-hand-BS | Pfam | 873 | 892 |
| IPR000048 | IQ_motif_EF-hand-BS | Pfam | 849 | 868 |
| IPR027417 | P-loop_NTPase | SUPERFAMILY | 845 | 898 |
| IPR000048 | IQ_motif_EF-hand-BS | ProSiteProfiles | 848 | 877 |
| IPR013783 | Ig-like_fold | Gene3D | 434 | 529 |
| IPR036770 | Ankyrin_rpt-contain_sf | SUPERFAMILY | 619 | 735 |
| IPR000048 | IQ_motif_EF-hand-BS | SMART | 870 | 892 |
| IPR000048 | IQ_motif_EF-hand-BS | SMART | 847 | 869 |
| IPR036770 | Ankyrin_rpt-contain_sf | Gene3D | 608 | 747 |
| IPR014756 | Ig_E-set | SUPERFAMILY | 441 | 526 |
| IPR002909 | IPT_dom | Pfam | 441 | 513 |
| IPR005559 | CG-1_dom | ProSiteProfiles | 15 | 141 |
| IPR000048 | IQ_motif_EF-hand-BS | ProSiteProfiles | 871 | 895 |
| IPR002110 | Ankyrin_rpt | Pfam | 629 | 700 |
| IPR013783 | Ig-like_fold | Gene3D | 434 | 529 |
| IPR036770 | Ankyrin_rpt-contain_sf | SUPERFAMILY | 619 | 735 |
| IPR005559 | CG-1_dom | SMART | 18 | 136 |
| IPR036770 | Ankyrin_rpt-contain_sf | Gene3D | 608 | 747 |
| IPR000048 | IQ_motif_EF-hand-BS | ProSiteProfiles | 871 | 895 |
| IPR005559 | CG-1_dom | Pfam | 21 | 134 |
| IPR000048 | IQ_motif_EF-hand-BS | Pfam | 873 | 892 |
| IPR000048 | IQ_motif_EF-hand-BS | Pfam | 849 | 868 |
| IPR000048 | IQ_motif_EF-hand-BS | ProSiteProfiles | 848 | 877 |
| IPR002110 | Ankyrin_rpt | ProSiteProfiles | 641 | 673 |
| IPR014756 | Ig_E-set | SUPERFAMILY | 441 | 526 |
| IPR005559 | CG-1_dom | ProSiteProfiles | 15 | 141 |
| IPR002110 | Ankyrin_rpt | ProSiteProfiles | 674 | 706 |
| IPR000048 | IQ_motif_EF-hand-BS | SMART | 870 | 892 |
| IPR000048 | IQ_motif_EF-hand-BS | SMART | 847 | 869 |
| IPR027417 | P-loop_NTPase | SUPERFAMILY | 845 | 898 |
| IPR002909 | IPT_dom | Pfam | 441 | 518 |
| IPR002110 | Ankyrin_rpt | SMART | 674 | 703 |
| IPR002110 | Ankyrin_rpt | SMART | 713 | 742 |
| IPR002110 | Ankyrin_rpt | SMART | 641 | 670 |
No CAZYmes available for this sequence
| No external refs found! |